mineCitrus: Extract and Analyze Median Molecule Intensity from 'citrus' Output

Citrus is a computational technique developed for the analysis of high dimensional cytometry data sets. This package extracts, statistically analyzes, and visualizes marker expression from 'citrus' data. This code was used to generate data for Figures 3 and 4 in the forthcoming manuscript: Throm et al. “Identification of Enhanced Interferon-Gamma Signaling in Polyarticular Juvenile Idiopathic Arthritis with Mass Cytometry”, JCI-Insight. For more information on Citrus, please see: Bruggner et al. (2014) <doi:10.1073/pnas.1408792111>. To download the 'citrus' package, please see <https://github.com/nolanlab/citrus>.

Version:	1.0.0
Depends:	R (≥ 2.10)
Imports:	ggplot2
Published:	2018-07-05
DOI:	10.32614/CRAN.package.mineCitrus
Author:	Allison Throm
Maintainer:	Allison Throm <throm at wustl.edu>
License:	GPL-2
NeedsCompilation:	no
CRAN checks:	mineCitrus results

Documentation:

Reference manual:

mineCitrus.pdf

Downloads:

Package source:	mineCitrus_1.0.0.tar.gz
Windows binaries:	r-devel: mineCitrus_1.0.0.zip, r-release: mineCitrus_1.0.0.zip, r-oldrel: mineCitrus_1.0.0.zip
macOS binaries:	r-release (arm64): mineCitrus_1.0.0.tgz, r-oldrel (arm64): mineCitrus_1.0.0.tgz, r-release (x86_64): mineCitrus_1.0.0.tgz, r-oldrel (x86_64): mineCitrus_1.0.0.tgz

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