Version 1.0.3
- Fixed a bug where a
multiqc_data.json file with
report_saved_raw_data containing arrays of data would break
the parser [#7]
Version 1.0.2
- Fixed a bug where a
multiqc_data.json file with
report_general_stats_data containing arrays of data would
break the parser [#7]
Version 1.0.1
- Fixed a bug when the
plots vector is not provided but
sections = "plot" [#5]
Version 1.0.0
Breaking Changes
- Removed the
plot_opts key from the
load_multiqc function. Instead, the plots are returned as
list columns with nested data frames inside the returned data frame.
Users are then able to parse out summary statistics using normal
dplyr and tidyr functions. Refer to the
vignette for examples. Also, instead of selecting plots using the names
of this argument, they are selected using the new plots
option (documented below) [#1].
- Renamed “plots” to “plot” in the
sections argument.
This ensures consistency with the data frame column names for plots,
which are “plot.XX”.
metadata.sample_id is now always the first column in
the data frame, even if you have provided a metadata function.
New Features
- Added
list_plots() utility function for listing the
available plots [#2].
- Added
plot_parsers argument to
load_multiqc which allows for custom parsers for diverse
plot types in MultiQC.
- Added
plots argument to load_multiqc,
which is a vector of plot identifiers to parse.
- Created a pkgdown website, which is available at https://multimeric.github.io/TidyMultiqc/.
- Added documentation for the plot parsers, which explains the format
of the nested data frame produced for each plot type.
- Added GitHub repository and issue tracker to package metadata [#3].
Bug fixes
- Fixed errors when the data frame contains no data (for example
because you only requested a single plot which isn’t present) [#2].