CDMConnector 1.4.0
- fix issue on cran server
- new omopgenerics methods
CDMConnector 1.3.1
- Bug fix for collapse cohort
- dbplyr 2.5.0 fixes
CDMConnector 1.3.0
CDMConnector 1.2.1
CDMConnector 1.2.0
- Compatibility with dbplyr v2.4.0
CDMConnector 1.1.4
- Fix recursive edge cases with cdm reference issue.
CDMConnector 1.1.3
- Fix recursive cdm reference issue. Thanks @catalamarti!
CDMConnector 1.1.2
CDMConnector 1.1.1
- add some bigquery support
August 22, 2023
CDMConnector 1.1.0
- add
copy_cdm_to
, copyCdmTo
- add
generate_concept_cohort_set
, generateConceptCohortSet
- add more example CDM datasets
- add
record_cohort_attrition
, recordCohortAttrition
- improve database test coverage
- update vignettes
Released Aug 17, 2023
CDMConnector 1.0.0
- remove
write_prefix
in cdm_from_con
in favor of using the write_schema
argument for prefixing
- remove
cdm_tables
argument from cdm_from_con
in favor of cdm_select_tbl
selection function
- add attributes to the cdm object to communicate downstream temp table preferences
Released June 7, 2023
CDMConnector 0.6.0
- generate Capr cohorts with
generateCohortSet
- add datepart function for extracting year, month, day parts of dates in dplyr
- fix datediff logic for years so it now returns number of complete years between two date
- add “write_prefix” attribute to cdm objects to support a namespace within the write_schema
Released May 5, 2023
CDMConnector 0.5.1
- Add both camelCase and snake_case versions of all functions (@Tsemharb)
- Add cdm object attributes to
cdm_snapshot
output
- use
number_records
and number_subjects
in cohort counts table
- Minor bug fixes
Released on March 20, 2023
CDMConnector 0.5.0
- Define
generatedCohortSet
class
- Add
summarize_quantile
for cross database quantile queries
- Add
GeneratedCohortSet
object, constructor, and attribute accessor functions
- Add vignette on cohort generation
- Add
cdmSubset
, cdmSubsetCohort
, cdmSample
for subsetting a cdm
- Add
cdmFlatten
for transforming a cdm into a single flat table of observations
- Improve test coverage
- Make Java dependency optional
cdm_schema
is now required in cdm_from_con
except for duckdb connections
- Remove visit_detail from default cdm tables
- Deprecate
computePermanent
- Improve package website
Substantial contributions by @edward-burn, @catalamarti, @Tsemharb who are now package co-authors.
Released Mar 8, 2023
CDMConnector 0.4.1
- Add
computeQuery
function for creating temp and persistent tables from dplyr queries
- Download Eunomia from darwin-eu repository as zipped csv files
- Add passing tests for Oracle and Spark
- Add
asDate
wrapper that provides correct as.Date dbplyr translations
- Incorporate code review suggestions from @mvankessel-EMC
Released Jan 21, 2023
CDMConnector 0.3.0
- Add computePermanent and appendPermanent functions
- Add readCohortSet
- Add generateCohortSet
- Extract Eunomia dataset so that it is downloaded separately
Released Nov 29, 2022
CDMConnector 0.2.0
- Add support for OMOP v5.3 and v5.4
- Add datediff and dateadd functions that can be used in dplyr::mutate()
- Add assert_tables function for checking that a cdm object has required tables
- Add camelCase versions of several functions
Released Nov 15, 2022
CDMConnector 0.1.0
- Initial release Sept 11, 2022
- Added a
NEWS.md
file to track changes to the package.