Last updated on 2025-10-11 13:49:47 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.21 | 256.80 | 270.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.41 | 227.58 | 238.99 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.03 | 250.02 | 263.05 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 197.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 189.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/139s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.053, elapsed: 1.990 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.907, system: 0.129, elapsed: 14.133 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.017, elapsed: 0.447 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.884, system: 0.259, elapsed: 7.518 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.007, elapsed: 0.271 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.176, system: 0.491, elapsed: 25.330 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.569, system: 0.064, elapsed: 2.875 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.120, system: 0.204, elapsed: 15.589 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.015, elapsed: 0.365 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.816, system: 0.228, elapsed: 6.447 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.006, elapsed: 0.303 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.402, system: 0.545, elapsed: 26.521 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.657, system: 0.059, elapsed: 2.882 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.097, system: 0.196, elapsed: 15.376 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.016, elapsed: 0.323 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.909, system: 0.289, elapsed: 6.529 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.007, elapsed: 0.253 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.173, system: 0.247, elapsed: 1.145 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.810, system: 0.849, elapsed: 27.575 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.061, elapsed: 2.354 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.176, system: 0.243, elapsed: 18.604 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.581 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.722, system: 0.179, elapsed: 8.200 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.005, elapsed: 0.356 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.250, system: 0.463, elapsed: 20.501 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.717, system: 0.994, elapsed: 51.972 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/124s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.632, system: 0.071, elapsed: 2.266 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.116, system: 0.256, elapsed: 13.576 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.019, elapsed: 0.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.674, system: 0.256, elapsed: 5.051 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.011, elapsed: 0.195 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.311, system: 0.644, elapsed: 22.066 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.648, system: 0.077, elapsed: 1.965 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.130, system: 0.275, elapsed: 12.335 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.014, elapsed: 0.283 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.776, system: 0.244, elapsed: 4.514 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.010, elapsed: 0.202 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.449, system: 0.666, elapsed: 20.064 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.753, system: 0.078, elapsed: 2.168 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.081, system: 0.279, elapsed: 10.940 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.014, elapsed: 0.199 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.600, system: 0.256, elapsed: 4.535 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.018, elapsed: 0.232 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.063, system: 0.262, elapsed: 1.034 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.475, system: 0.952, elapsed: 19.874 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.751, system: 0.091, elapsed: 2.216 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.942, system: 0.113, elapsed: 20.343 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.011, elapsed: 0.261 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.532, system: 0.163, elapsed: 5.792 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.313 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.996, system: 0.431, elapsed: 24.323 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.212, system: 0.850, elapsed: 54.237 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64