Last updated on 2026-04-09 08:50:16 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.6.0.1 | 5.28 | 128.94 | 134.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.6.0.1 | 3.76 | 62.06 | 65.82 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.6.0.1 | 209.23 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.6.0.1 | 8.00 | 206.64 | 214.64 | OK | |
| r-devel-macos-arm64 | 0.6.0.1 | 1.00 | 35.00 | 36.00 | OK | |
| r-devel-windows-x86_64 | 0.6.0.1 | 6.00 | 139.00 | 145.00 | OK | |
| r-patched-linux-x86_64 | 0.6.0.1 | 5.49 | 122.58 | 128.07 | OK | |
| r-release-linux-x86_64 | 0.6.0.1 | 3.98 | 119.46 | 123.44 | OK | |
| r-release-macos-arm64 | 0.6.0.1 | 1.00 | 39.00 | 40.00 | OK | |
| r-release-macos-x86_64 | 0.6.0.1 | 4.00 | 147.00 | 151.00 | OK | |
| r-release-windows-x86_64 | 0.6.0.1 | 7.00 | 140.00 | 147.00 | OK | |
| r-oldrel-macos-arm64 | 0.6.0.1 | 1.00 | 43.00 | 44.00 | OK | |
| r-oldrel-macos-x86_64 | 0.6.0.1 | 4.00 | 179.00 | 183.00 | OK | |
| r-oldrel-windows-x86_64 | 0.6.0.1 | 9.00 | 177.00 | 186.00 | OK |
Version: 0.6.0.1
Check: examples
Result: ERROR
Running examples in ‘GeometricMorphometricsMix-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: disparity_resample
> ### Title: Resampling-based estimates (bootstrap or rarefaction) of
> ### disparity / morphospace occupation
> ### Aliases: disparity_resample
>
> ### ** Examples
>
> set.seed(123)
> # Simulate two groups with different means but same covariance
> if (requireNamespace("MASS", quietly = TRUE)) {
+ X1 = MASS::mvrnorm(20, mu=rep(0, 10), Sigma=diag(10))
+ X2 = MASS::mvrnorm(35, mu=rep(2, 10), Sigma=diag(10))
+ Data = rbind(X1, X2)
+ grp = factor(c(rep("A", nrow(X1)), rep("B", nrow(X2))))
+
+ # Sequential processing
+ # future::plan(future::sequential) # Default sequential processing
+
+ # Parallel processing (uncomment to use)
+ # future::plan(future::multisession, workers = 2) # Use 2 workers
+
+ # Bootstrap multivariate variance
+ boot_res = disparity_resample(
+ Data, group=grp, n_resamples=200,
+ statistic="multivariate_variance",
+ bootstrap_rarefaction="bootstrap"
+ )
+ # Direct access to results table
+ boot_res$results
+
+ # Using the print method for formatted output
+ print(boot_res)
+
+ # Using the plot method to visualize results
+ # plot(boot_res) # Uncomment to create confidence interval plot
+
+ # Rarefaction (to the smallest group size) of mean pairwise
+ # Euclidean distance
+ rar_res = disparity_resample(
+ Data, group=grp, n_resamples=200,
+ statistic="mean_pairwise_euclidean_distance",
+ bootstrap_rarefaction="rarefaction", sample_size="smallest"
+ )
+ # Now simulate a third group with larger variance
+ X3 = MASS::mvrnorm(15, mu=rep(0, 10), Sigma=diag(10)*1.5)
+ grp2 = factor(
+ c(rep("A", nrow(X1)), rep("B", nrow(X2)), rep("C", nrow(X3)))
+ )
+ boot_res2 = disparity_resample(
+ Data=rbind(X1, X2, X3), group=grp2, n_resamples=1000,
+ statistic="multivariate_variance",
+ bootstrap_rarefaction="bootstrap"
+ )
+ print(boot_res2)
+ # plot(boot_res2)
+ # Plot of the obtained (95%) confidence intervals (uncomment to plot)
+
+ # Reset to sequential processing when done (optional)
+ # future::plan(future::sequential)
+ }
Warning: Caught FutureLaunchError. Canceling all iterations ...
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future (‘future_lapply-1’) on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3576221) at 2026-04-08T13:31:20. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called ‘geometry’ [future <unnamed>; on 94de78b76675cee0ea09695d8b8f7814@gimli1<3576221>] [future ‘future_lapply-1’ (94de78b76675cee0ea09695d8b8f7814-1); on 94de78b76675cee0ea09695d8b8f7814@gimli1<3576221>]
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.6.0.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/16s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
>
>
> library(testthat)
> library(GeometricMorphometricsMix)
Loading required package: ape
Loading required package: corpcor
>
> test_check("GeometricMorphometricsMix")
Saving _problems/test-disparity_resample-43.R
Saving _problems/test-disparity_resample-66.R
Saving _problems/test-disparity_resample-81.R
Saving _problems/test-disparity_resample-145.R
Saving _problems/test-disparity_resample-157.R
Saving _problems/test-disparity_resample-199.R
Saving _problems/test-disparity_resample-209.R
Saving _problems/test-disparity_resample-230.R
Saving _problems/test-disparity_resample-246.R
Saving _problems/test-disparity_resample-267.R
Saving _problems/test-disparity_resample-279.R
Saving _problems/test-disparity_resample-289.R
Saving _problems/test-disparity_resample-302.R
Saving _problems/test-disparity_resample-316.R
Saving _problems/test-disparity_resample-333.R
Saving _problems/test-disparity_resample-345.R
Saving _problems/test-disparity_resample-361.R
Saving _problems/test-disparity_resample_integration-13.R
Saving _problems/test-disparity_resample_integration-23.R
Saving _problems/test-disparity_resample_integration-33.R
Saving _problems/test-disparity_resample_integration-43.R
Saving _problems/test-disparity_resample_integration-74.R
Saving _problems/test-disparity_resample_integration-85.R
Saving _problems/test-disparity_resample_integration-94.R
Saving _problems/test-disparity_resample_integration-121.R
Saving _problems/test-disparity_resample_integration-131.R
Saving _problems/test-disparity_resample_integration-143.R
Saving _problems/test-disparity_resample_integration-182.R
Saving _problems/test-disparity_resample_methods-24.R
Saving _problems/test-disparity_resample_methods-40.R
Saving _problems/test-disparity_resample_methods-54.R
Saving _problems/test-disparity_resample_methods-66.R
Saving _problems/test-disparity_resample_methods-76.R
Saving _problems/test-disparity_resample_methods-96.R
Saving _problems/test-disparity_resample_methods-112.R
Saving _problems/test-disparity_resample_methods-123.R
Saving _problems/test-disparity_resample_methods-140.R
Saving _problems/test-disparity_resample_methods-160.R
Saving _problems/test-disparity_resample_methods-170.R
Saving _problems/test-disparity_resample_methods-176.R
[ FAIL 40 | WARN 40 | SKIP 4 | PASS 97 ]
══ Skipped tests (4) ═══════════════════════════════════════════════════════════
• On CRAN (2): 'test-disparity_resample_integration.R:55:3',
'test-disparity_resample_integration.R:193:3'
• {geometry} is not installed (2): 'test-disparity_resample.R:167:3',
'test-disparity_resample.R:181:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-disparity_resample.R:42:3'): disparity_resample returns correct structure ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:24. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-1); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:42:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:66:3'): disparity_resample works with single group ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:24. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-2); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:66:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:80:3'): disparity_resample works with univariate data ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:24. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-3); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:80:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:142:3'): disparity_resample handles missing data correctly ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:25. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-4); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-disparity_resample.R:142:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─GeometricMorphometricsMix::disparity_resample(...)
8. ├─base::unlist(...)
9. └─future.apply::future_lapply(...)
10. └─future.apply:::future_xapply(...)
11. └─base::tryCatch(...)
12. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
13. └─base (local) tryCatchOne(...)
14. └─value[[3L]](cond)
15. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:156:3'): disparity_resample statistics work correctly ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:25. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-5); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:156:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:198:3'): disparity_resample Claramunt proper variance works ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:25. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-6); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:198:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:208:3'): disparity_resample bootstrap vs rarefaction work correctly ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:25. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-7); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:208:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:228:3'): disparity_resample custom sample sizes work ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:25. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-8); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:228:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:245:3'): disparity_resample CI levels work correctly ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:26. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-9); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:245:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:267:3'): disparity_resample handles data frame input ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:26. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-10); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:267:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:279:3'): disparity_resample handles 3D array input ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:28. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-11); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:279:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:287:3'): disparity_resample sample_size='smallest' validation works ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:28. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-12); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:287:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:301:3'): print.disparity_resample method works ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:28. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-13); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:301:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:315:3'): plot.disparity_resample method works ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:28. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-14); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:315:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:333:3'): disparity_resample numerical accuracy ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:29. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-15); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(known_data, n_resamples = 1000) at test-disparity_resample.R:333:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:344:3'): disparity_resample reproducibility with set.seed ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:29. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-16); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:344:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample.R:361:3'): disparity_resample edge case: minimum valid group sizes ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:29. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-17); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample.R:361:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:13:5'): disparity_resample works with brown_trout dataset ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:29. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-18); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_integration.R:13:5
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:23:3'): disparity_resample handles very small datasets ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:29. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-19); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(min_data, n_resamples = 10) at test-disparity_resample_integration.R:23:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:33:3'): disparity_resample handles large number of resamples ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:30. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-20); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(test_data, n_resamples = 5000) at test-disparity_resample_integration.R:33:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:43:3'): disparity_resample handles extreme CI values ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:30. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-21); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_integration.R:43:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:74:3'): disparity_resample handles data with extreme values ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:30. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-22); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(extreme_data, n_resamples = 50) at test-disparity_resample_integration.R:74:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:85:3'): disparity_resample handles perfectly correlated data ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:30. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-23); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_integration.R:85:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:94:3'): disparity_resample handles constant data ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:31. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-24); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_integration.R:94:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:119:3'): disparity_resample handles unbalanced groups appropriately ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:31. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-25); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_integration.R:119:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:131:3'): disparity_resample handles character group labels correctly ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:31. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-26); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_integration.R:131:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:143:3'): disparity_resample handles numeric group labels correctly ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:31. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-27); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_integration.R:143:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_integration.R:182:3'): disparity_resample reproducibility across R sessions ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:31. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-28); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_integration.R:182:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:24:3'): print.disparity_resample works with multiple groups ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:32. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-29); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix (local) setup_test_results() at test-disparity_resample_methods.R:24:3
2. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:12:3
3. ├─base::unlist(...)
4. └─future.apply::future_lapply(...)
5. └─future.apply:::future_xapply(...)
6. └─base::tryCatch(...)
7. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. └─base (local) tryCatchOne(...)
9. └─value[[3L]](cond)
10. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:40:3'): print.disparity_resample works with single group ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:32. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-30); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix (local) setup_test_results() at test-disparity_resample_methods.R:40:3
2. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:12:3
3. ├─base::unlist(...)
4. └─future.apply::future_lapply(...)
5. └─future.apply:::future_xapply(...)
6. └─base::tryCatch(...)
7. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. └─base (local) tryCatchOne(...)
9. └─value[[3L]](cond)
10. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:54:3'): print.disparity_resample handles range results correctly ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:32. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-31); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix (local) setup_test_results() at test-disparity_resample_methods.R:54:3
2. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:12:3
3. ├─base::unlist(...)
4. └─future.apply::future_lapply(...)
5. └─future.apply:::future_xapply(...)
6. └─base::tryCatch(...)
7. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. └─base (local) tryCatchOne(...)
9. └─value[[3L]](cond)
10. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:66:3'): print.disparity_resample returns object invisibly ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:32. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-32); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix (local) setup_test_results() at test-disparity_resample_methods.R:66:3
2. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:12:3
3. ├─base::unlist(...)
4. └─future.apply::future_lapply(...)
5. └─future.apply:::future_xapply(...)
6. └─base::tryCatch(...)
7. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. └─base (local) tryCatchOne(...)
9. └─value[[3L]](cond)
10. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:76:3'): plot.disparity_resample works with multiple groups ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:32. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-33); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix (local) setup_test_results() at test-disparity_resample_methods.R:76:3
2. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:12:3
3. ├─base::unlist(...)
4. └─future.apply::future_lapply(...)
5. └─future.apply:::future_xapply(...)
6. └─base::tryCatch(...)
7. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. └─base (local) tryCatchOne(...)
9. └─value[[3L]](cond)
10. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:96:3'): plot.disparity_resample works with single group ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:33. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-34); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix (local) setup_test_results() at test-disparity_resample_methods.R:96:3
2. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:12:3
3. ├─base::unlist(...)
4. └─future.apply::future_lapply(...)
5. └─future.apply:::future_xapply(...)
6. └─base::tryCatch(...)
7. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. └─base (local) tryCatchOne(...)
9. └─value[[3L]](cond)
10. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:112:3'): plot.disparity_resample handles range results ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:33. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-35); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix (local) setup_test_results() at test-disparity_resample_methods.R:112:3
2. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:12:3
3. ├─base::unlist(...)
4. └─future.apply::future_lapply(...)
5. └─future.apply:::future_xapply(...)
6. └─base::tryCatch(...)
7. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. └─base (local) tryCatchOne(...)
9. └─value[[3L]](cond)
10. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:123:3'): plot.disparity_resample accepts additional arguments ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:33. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-36); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix (local) setup_test_results() at test-disparity_resample_methods.R:123:3
2. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:12:3
3. ├─base::unlist(...)
4. └─future.apply::future_lapply(...)
5. └─future.apply:::future_xapply(...)
6. └─base::tryCatch(...)
7. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. └─base (local) tryCatchOne(...)
9. └─value[[3L]](cond)
10. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:140:3'): print.disparity_resample overlap assessment works correctly ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:33. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-37); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:140:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:158:3'): print.disparity_resample handles different statistics ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:33. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-38); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:158:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:170:3'): print.disparity_resample handles univariate data ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:34. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-39); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:170:3
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
── Error ('test-disparity_resample_methods.R:176:3'): S3 method dispatch works correctly ──
<FutureLaunchError/FutureError/error/FutureCondition/condition>
Error: Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3585136) at 2026-04-08T13:31:34. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>] [future 'future_lapply-1' (1b2ce151c7d9e131d7600e7ad018b16f-40); on 1b2ce151c7d9e131d7600e7ad018b16f@gimli1<3585136>]
Backtrace:
▆
1. └─GeometricMorphometricsMix (local) setup_test_results() at test-disparity_resample_methods.R:176:3
2. └─GeometricMorphometricsMix::disparity_resample(...) at test-disparity_resample_methods.R:12:3
3. ├─base::unlist(...)
4. └─future.apply::future_lapply(...)
5. └─future.apply:::future_xapply(...)
6. └─base::tryCatch(...)
7. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. └─base (local) tryCatchOne(...)
9. └─value[[3L]](cond)
10. └─future.apply:::onError(e, futures = fs, debug = debug)
[ FAIL 40 | WARN 40 | SKIP 4 | PASS 97 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.6.0.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘disparity_analysis.Rmd’ using rmarkdown
Quitting from disparity_analysis.Rmd:84-110 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3603579) at 2026-04-08T13:31:40. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on f214ef86f86415da99e21a56170d75d8@gimli1<3603579>] [future 'future_lapply-1' (f214ef86f86415da99e21a56170d75d8-1); on f214ef86f86415da99e21a56170d75d8@gimli1<3603579>]
---
Backtrace:
▆
1. └─GeometricMorphometricsMix::disparity_resample(...)
2. ├─base::unlist(...)
3. └─future.apply::future_lapply(...)
4. └─future.apply:::future_xapply(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(...)
8. └─value[[3L]](cond)
9. └─future.apply:::onError(e, futures = fs, debug = debug)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'disparity_analysis.Rmd' failed with diagnostics:
Caught an unexpected error of class FutureLaunchError when trying to launch future ('future_lapply-1') on backend of class SequentialFutureBackend. The reason was: future::evalFuture() failed on gimli1 (pid 3603579) at 2026-04-08T13:31:40. Using package 'future' v1.70.0. Possible other reasons: Failed to attach one or more packages: there is no package called 'geometry' [future <unnamed>; on f214ef86f86415da99e21a56170d75d8@gimli1<3603579>] [future 'future_lapply-1' (f214ef86f86415da99e21a56170d75d8-1); on f214ef86f86415da99e21a56170d75d8@gimli1<3603579>]
--- failed re-building ‘disparity_analysis.Rmd’
--- re-building ‘pls_analysis_use_case.Rmd’ using rmarkdown
--- finished re-building ‘pls_analysis_use_case.Rmd’
SUMMARY: processing the following file failed:
‘disparity_analysis.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc